Hotels in Henderson Harbor

Q: What accommodations do travelers like in Henderson Harbor?

Guests like The GillHouse and Harbor House Inn .

Q: Where should I stay in Henderson Harbor if I'm looking for an affordable accommodation?

An inexpensive option worth considering is The GillHouse .

Free cancellation options if plans change

Earn rewards on every night you stay

Save more with Member Prices

Check prices for these dates

Tonight

Tomorrow

This weekend

Next weekend

Where to stay in Henderson Harbor?

The GillHouse

Henderson Harbor

$183 total

includes taxes & fees

Jun 18 - Jun 19

Ramada by Wyndham Watertown/Thousand Islands NY

Watertown

$90 total

includes taxes & fees

Jun 21 - Jun 22

Allen's Budget Motel

Watertown

$67 total

includes taxes & fees

Jun 17 - Jun 18

Deluxe Single Room, 1 Queen Bed | Living area | TV

Nest Inn

Watertown

$75 total

includes taxes & fees

Jul 3 - Jul 4

Desk, iron/ironing board, free cribs/infant beds, free WiFi

Comfort Inn & Suites Watertown - 1000 Islands

Watertown

$131 total

includes taxes & fees

Jul 5 - Jul 6

Hampton Inn Watertown

Watertown

$131 total

includes taxes & fees

Jun 28 - Jun 29

Travel Inn

Watertown

$84 total

includes taxes & fees

Jun 18 - Jun 19

Studio Suite, 1 King Bed, Non Smoking | Desk, iron/ironing board, free WiFi, bed sheets

Days Inn by Wyndham Watertown Fort Drum

Calcium

$92 total

includes taxes & fees

Jun 21 - Jun 22

Royal Inn Motel

Watertown

$69 total

includes taxes & fees

Jun 18 - Jun 19

Quality Inn & Suites Watertown Fort Drum

Calcium

$99 total

includes taxes & fees

Jun 21 - Jun 22

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Watertown

$154 total

includes taxes & fees

Jun 21 - Jun 22

Hilton Garden Inn Watertown/Thousand Islands

Watertown

$143 total

includes taxes & fees

Jul 5 - Jul 6

Fairfield Inn & Suites Watertown Thousand Islands

Watertown

$147 total

includes taxes & fees

Jun 28 - Jun 29

Premium Room, 1 Queen Bed with Sofa bed | Free WiFi

Harbor House Inn

Sackets Harbor

$230 total

includes taxes & fees

Jun 21 - Jun 22

Indoor pool, open 2:00 PM to 9:30 PM, sun loungers

Adirondack Efficiencies Watertown

Watertown

$78 total

includes taxes & fees

Jun 17 - Jun 18

Studio Suite, 2 Queen Beds | Premium bedding, individually decorated, individually furnished, desk

Candlewood Suites Watertown Fort Drum by IHG

Evans Mills

$149 total

includes taxes & fees

Jun 21 - Jun 22

View all properties

Go beyond your typical stay in Henderson Harbor

Family friendly

Pool

Top landmarks in Henderson Harbor

Saiff Charters

Saiff Charters is 0.3 mi (0.5 km) from central Henderson Harbor, why not stop by during your stay.

See properties

Learn more about Henderson Harbor

Henderson Harbor is well-known for its attractions such as Lake Ontario and Saiff Charters.

See all hotels in Henderson Harbor

Check out reviews of Henderson Harbor hotels guests love

Hampton Inn Watertown

10/10 Excellent

"Everything was great"

Nest Inn

10/10 Excellent

"Loved this small, cozy and quiet motel. Easy to get to and convenient to places in Watertown, NY. Owner is doing renovation to the motel but it does not affect the rooms he is renting out. Room and bathroom were clean and the king size bed extremely comfortable with quality linens. Price was very reasonable and will definitely stay there again on future trips"

Comfort Inn & Suites Watertown - 1000 Islands

10/10 Excellent

"The hotel was very comfortable with good AC in the room and WIFI throughout. You could tell that the hotel had seen better days, i.e dated lobby area, pool was broken and link to restaurant was no longer useable since Denny's was closed. The breakfast was very adequate, with some hot food and good waffle makers. The room was modern in some ways but the bathroom especially the toilet was not user friendly, too low to the ground for seniors."

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

10/10 Excellent

"This was our 2nd year staying here for our girls weekend. We enjoy how easy and friendly the check in was. We were early but had no problem checking in. The room was clean, the beds comfortable and it was quiet. The pool was wonderful and breakfast hade a nice variety of. We will be back again!"

Frequently asked questions

What accommodations do travelers like in Henderson Harbor?

Guests like The GillHouse and Harbor House Inn.

Can I book refundable accommodations in Henderson Harbor?

If you want the flexibility to change your plans to Henderson Harbor, most hotels provide refundable* bookable rates. You can see these accommodations by searching our site and using the "fully refundable" filter to narrow down the results.

Where should I stay in Henderson Harbor if I'm looking for an affordable accommodation?

An inexpensive option worth considering is The GillHouse.

What will the weather in Henderson Harbor be like during my vacation?

July and August are typically the warmest months in Henderson Harbor when the average temp is 66°F. January and February are the coldest months when the average temperature is 27°F. October and July are the months with the most rain.

Why should I book my Henderson Harbor hotel with Hotels.com?

There are lots of reasons to book your Henderson Harbor trip with us: our free cancellations on selected hotels gives you flexibility, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

Keep exploring

More ways to book

Book Hotels in Henderson Harbor on Hotels.com